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convert_file -> nodes_from_xml_path

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Steven Robertson 2012-07-22 15:54:19 -07:00
parent 3294ba10d6
commit c4727a48fc
1 changed files with 2 additions and 2 deletions
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4
cuburn/genome/convert.py
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@ -172,7 +172,7 @@ def flam3_to_node(flame):
n['type'] = 'node' n['type'] = 'node'
return n return n
def convert_file(path): def nodes_from_xml_path(path):
"""Quick one-shot conversion for an XML genome.""" """Quick one-shot conversion for an XML genome."""
flames = XMLGenomeParser.parse(open(path).read()) flames = XMLGenomeParser.parse(open(path).read())
if len(flames) > 10: if len(flames) > 10:
@ -183,4 +183,4 @@ def convert_file(path):
if __name__ == "__main__": if __name__ == "__main__":
import sys import sys
print '\n\n'.join(map(to_json, convert_file(sys.argv[1]))) print '\n\n'.join(map(to_json, nodes_from_xml_path(sys.argv[1])))