mirror of
https://github.com/bspeice/speice.io
synced 2024-12-23 00:58:09 -05:00
373 lines
12 KiB
Plaintext
373 lines
12 KiB
Plaintext
---
|
|
slug: 2019/12/release-the-gil
|
|
title: Release the GIL
|
|
date: 2019-12-14 12:00:00
|
|
authors: [bspeice]
|
|
tags: []
|
|
---
|
|
|
|
Complaining about the [Global Interpreter Lock](https://wiki.python.org/moin/GlobalInterpreterLock)
|
|
(GIL) seems like a rite of passage for Python developers. It's easy to criticize a design decision
|
|
made before multi-core CPU's were widely available, but the fact that it's still around indicates
|
|
that it generally works [Good](https://wiki.c2.com/?PrematureOptimization)
|
|
[Enough](https://wiki.c2.com/?YouArentGonnaNeedIt). Besides, there are simple and effective
|
|
workarounds; it's not hard to start a
|
|
[new process](https://docs.python.org/3/library/multiprocessing.html) and use message passing to
|
|
synchronize code running in parallel.
|
|
|
|
Still, wouldn't it be nice to have more than a single active interpreter thread? In an age of
|
|
asynchronicity and _M:N_ threading, Python seems lacking. The ideal scenario is to take advantage of
|
|
both Python's productivity and the modern CPU's parallel capabilities.
|
|
|
|
<!-- truncate -->
|
|
|
|
Presented below are two strategies for releasing the GIL's icy grip without giving up on what makes
|
|
Python a nice language to start with. Bear in mind: these are just the tools, no claim is made about
|
|
whether it's a good idea to use them. Very often, unlocking the GIL is an
|
|
[XY problem](https://en.wikipedia.org/wiki/XY_problem); you want application performance, and the
|
|
GIL seems like an obvious bottleneck. Remember that any gains from running code in parallel come at
|
|
the expense of project complexity; messing with the GIL is ultimately messing with Python's memory
|
|
model.
|
|
|
|
```python
|
|
%load_ext Cython
|
|
from numba import jit
|
|
|
|
N = 1_000_000_000
|
|
```
|
|
|
|
## Cython
|
|
|
|
Put simply, [Cython](https://cython.org/) is a programming language that looks a lot like Python,
|
|
gets [transpiled](https://en.wikipedia.org/wiki/Source-to-source_compiler) to C/C++, and integrates
|
|
well with the [CPython](https://en.wikipedia.org/wiki/CPython) API. It's great for building Python
|
|
wrappers to C and C++ libraries, writing optimized code for numerical processing, and tons more. And
|
|
when it comes to managing the GIL, there are two special features:
|
|
|
|
- The `nogil`
|
|
[function annotation](https://cython.readthedocs.io/en/latest/src/userguide/external_C_code.html#declaring-a-function-as-callable-without-the-gil)
|
|
asserts that a Cython function is safe to use without the GIL, and compilation will fail if it
|
|
interacts with Python in an unsafe manner
|
|
- The `with nogil`
|
|
[context manager](https://cython.readthedocs.io/en/latest/src/userguide/external_C_code.html#releasing-the-gil)
|
|
explicitly unlocks the CPython GIL while active
|
|
|
|
Whenever Cython code runs inside a `with nogil` block on a separate thread, the Python interpreter
|
|
is unblocked and allowed to continue work elsewhere. We'll define a "busy work" function that
|
|
demonstrates this principle in action:
|
|
|
|
```python
|
|
%%cython
|
|
|
|
# Annotating a function with `nogil` indicates only that it is safe
|
|
# to call in a `with nogil` block. It *does not* release the GIL.
|
|
cdef unsigned long fibonacci(unsigned long n) nogil:
|
|
if n <= 1:
|
|
return n
|
|
|
|
cdef unsigned long a = 0, b = 1, c = 0
|
|
|
|
c = a + b
|
|
for _i in range(2, n):
|
|
a = b
|
|
b = c
|
|
c = a + b
|
|
|
|
return c
|
|
|
|
|
|
def cython_nogil(unsigned long n):
|
|
# Explicitly release the GIL while running `fibonacci`
|
|
with nogil:
|
|
value = fibonacci(n)
|
|
|
|
return value
|
|
|
|
|
|
def cython_gil(unsigned long n):
|
|
# Because the GIL is not explicitly released, it implicitly
|
|
# remains acquired when running the `fibonacci` function
|
|
return fibonacci(n)
|
|
```
|
|
|
|
First, let's time how long it takes Cython to calculate the billionth Fibonacci number:
|
|
|
|
```python
|
|
%%time
|
|
_ = cython_gil(N);
|
|
```
|
|
|
|
> <pre>
|
|
> CPU times: user 365 ms, sys: 0 ns, total: 365 ms
|
|
> Wall time: 372 ms
|
|
> </pre>
|
|
|
|
```python
|
|
%%time
|
|
_ = cython_nogil(N);
|
|
```
|
|
|
|
> <pre>
|
|
> CPU times: user 381 ms, sys: 0 ns, total: 381 ms
|
|
> Wall time: 388 ms
|
|
> </pre>
|
|
|
|
Both versions (with and without GIL) take effectively the same amount of time to run. Even when
|
|
running this calculation in parallel on separate threads, it is expected that the run time will
|
|
double because only one thread can be active at a time:
|
|
|
|
```python
|
|
%%time
|
|
from threading import Thread
|
|
|
|
# Create the two threads to run on
|
|
t1 = Thread(target=cython_gil, args=[N])
|
|
t2 = Thread(target=cython_gil, args=[N])
|
|
# Start the threads
|
|
t1.start(); t2.start()
|
|
# Wait for the threads to finish
|
|
t1.join(); t2.join()
|
|
```
|
|
|
|
> <pre>
|
|
> CPU times: user 641 ms, sys: 5.62 ms, total: 647 ms
|
|
> Wall time: 645 ms
|
|
> </pre>
|
|
|
|
However, if the first thread releases the GIL, the second thread is free to acquire it and run in
|
|
parallel:
|
|
|
|
```python
|
|
%%time
|
|
|
|
t1 = Thread(target=cython_nogil, args=[N])
|
|
t2 = Thread(target=cython_gil, args=[N])
|
|
t1.start(); t2.start()
|
|
t1.join(); t2.join()
|
|
```
|
|
|
|
> <pre>
|
|
> CPU times: user 717 ms, sys: 372 µs, total: 718 ms
|
|
> Wall time: 358 ms
|
|
> </pre>
|
|
|
|
Because `user` time represents the sum of processing time on all threads, it doesn't change much.
|
|
The ["wall time"](https://en.wikipedia.org/wiki/Elapsed_real_time) has been cut roughly in half
|
|
because each function is running simultaneously.
|
|
|
|
Keep in mind that the **order in which threads are started** makes a difference!
|
|
|
|
```python
|
|
%%time
|
|
|
|
# Note that the GIL-locked version is started first
|
|
t1 = Thread(target=cython_gil, args=[N])
|
|
t2 = Thread(target=cython_nogil, args=[N])
|
|
t1.start(); t2.start()
|
|
t1.join(); t2.join()
|
|
```
|
|
|
|
> <pre>
|
|
> CPU times: user 667 ms, sys: 0 ns, total: 667 ms
|
|
> Wall time: 672 ms
|
|
> </pre>
|
|
|
|
Even though the second thread releases the GIL while running, it can't start until the first has
|
|
completed. Thus, the overall runtime is effectively the same as running two GIL-locked threads.
|
|
|
|
Finally, be aware that attempting to unlock the GIL from a thread that doesn't own it will crash the
|
|
**interpreter**, not just the thread attempting the unlock:
|
|
|
|
```python
|
|
%%cython
|
|
|
|
cdef int cython_recurse(int n) nogil:
|
|
if n <= 0:
|
|
return 0
|
|
|
|
with nogil:
|
|
return cython_recurse(n - 1)
|
|
|
|
cython_recurse(2)
|
|
```
|
|
|
|
> <pre>
|
|
> Fatal Python error: PyEval_SaveThread: NULL tstate
|
|
>
|
|
> Thread 0x00007f499effd700 (most recent call first):
|
|
> File "/home/bspeice/.virtualenvs/release-the-gil/lib/python3.7/site-packages/ipykernel/parentpoller.py", line 39 in run
|
|
> File "/usr/lib/python3.7/threading.py", line 926 in _bootstrap_inner
|
|
> File "/usr/lib/python3.7/threading.py", line 890 in _bootstrap
|
|
> </pre>
|
|
|
|
In practice, avoiding this issue is simple. First, `nogil` functions probably shouldn't contain
|
|
`with nogil` blocks. Second, Cython can
|
|
[conditionally acquire/release](https://cython.readthedocs.io/en/latest/src/userguide/external_C_code.html#conditional-acquiring-releasing-the-gil)
|
|
the GIL, so these conditions can be used to synchronize access. Finally, Cython's documentation for
|
|
[external C code](https://cython.readthedocs.io/en/latest/src/userguide/external_C_code.html#acquiring-and-releasing-the-gil)
|
|
contains more detail on how to safely manage the GIL.
|
|
|
|
To conclude: use Cython's `nogil` annotation to assert that functions are safe for calling when the
|
|
GIL is unlocked, and `with nogil` to actually unlock the GIL and run those functions.
|
|
|
|
## Numba
|
|
|
|
Like Cython, [Numba](https://numba.pydata.org/) is a "compiled Python." Where Cython works by
|
|
compiling a Python-like language to C/C++, Numba compiles Python bytecode _directly to machine code_
|
|
at runtime. Behavior is controlled with a special `@jit` decorator; calling a decorated function
|
|
first compiles it to machine code before running. Calling the function a second time re-uses that
|
|
machine code unless the argument types have changed.
|
|
|
|
Numba works best when a `nopython=True` argument is added to the `@jit` decorator; functions
|
|
compiled in [`nopython`](http://numba.pydata.org/numba-doc/latest/user/jit.html?#nopython) mode
|
|
avoid the CPython API and have performance comparable to C. Further, adding `nogil=True` to the
|
|
`@jit` decorator unlocks the GIL while that function is running. Note that `nogil` and `nopython`
|
|
are separate arguments; while it is necessary for code to be compiled in `nopython` mode in order to
|
|
release the lock, the GIL will remain locked if `nogil=False` (the default).
|
|
|
|
Let's repeat the same experiment, this time using Numba instead of Cython:
|
|
|
|
```python
|
|
# The `int` type annotation is only for humans and is ignored
|
|
# by Numba.
|
|
@jit(nopython=True, nogil=True)
|
|
def numba_nogil(n: int) -> int:
|
|
if n <= 1:
|
|
return n
|
|
|
|
a = 0
|
|
b = 1
|
|
|
|
c = a + b
|
|
for _i in range(2, n):
|
|
a = b
|
|
b = c
|
|
c = a + b
|
|
|
|
return c
|
|
|
|
|
|
# Run using `nopython` mode to receive a performance boost,
|
|
# but GIL remains locked due to `nogil=False` by default.
|
|
@jit(nopython=True)
|
|
def numba_gil(n: int) -> int:
|
|
if n <= 1:
|
|
return n
|
|
|
|
a = 0
|
|
b = 1
|
|
|
|
c = a + b
|
|
for _i in range(2, n):
|
|
a = b
|
|
b = c
|
|
c = a + b
|
|
|
|
return c
|
|
|
|
|
|
# Call each function once to force compilation; we don't want
|
|
# the timing statistics to include how long it takes to compile.
|
|
numba_nogil(N)
|
|
numba_gil(N);
|
|
```
|
|
|
|
We'll perform the same tests as above; first, figure out how long it takes the function to run:
|
|
|
|
```python
|
|
%%time
|
|
_ = numba_gil(N)
|
|
```
|
|
|
|
> <pre>
|
|
> CPU times: user 253 ms, sys: 258 µs, total: 253 ms
|
|
> Wall time: 251 ms
|
|
> </pre>
|
|
|
|
<small>
|
|
Aside: it's not immediately clear why Numba takes ~20% less time to run than Cython for code that should be
|
|
effectively identical after compilation.
|
|
</small>
|
|
|
|
When running two GIL-locked threads, the result (as expected) takes around twice as long to compute:
|
|
|
|
```python
|
|
%%time
|
|
t1 = Thread(target=numba_gil, args=[N])
|
|
t2 = Thread(target=numba_gil, args=[N])
|
|
t1.start(); t2.start()
|
|
t1.join(); t2.join()
|
|
```
|
|
|
|
> <pre>
|
|
> CPU times: user 541 ms, sys: 3.96 ms, total: 545 ms
|
|
> Wall time: 541 ms
|
|
> </pre>
|
|
|
|
But if the GIL-unlocking thread starts first, both threads run in parallel:
|
|
|
|
```python
|
|
%%time
|
|
t1 = Thread(target=numba_nogil, args=[N])
|
|
t2 = Thread(target=numba_gil, args=[N])
|
|
t1.start(); t2.start()
|
|
t1.join(); t2.join()
|
|
```
|
|
|
|
> <pre>
|
|
> CPU times: user 551 ms, sys: 7.77 ms, total: 559 ms
|
|
> Wall time: 279 ms
|
|
> </pre>
|
|
|
|
Just like Cython, starting the GIL-locked thread first leads to poor performance:
|
|
|
|
```python
|
|
%%time
|
|
t1 = Thread(target=numba_gil, args=[N])
|
|
t2 = Thread(target=numba_nogil, args=[N])
|
|
t1.start(); t2.start()
|
|
t1.join(); t2.join()
|
|
```
|
|
|
|
> <pre>
|
|
> CPU times: user 524 ms, sys: 0 ns, total: 524 ms
|
|
> Wall time: 522 ms
|
|
> </pre>
|
|
|
|
Finally, unlike Cython, Numba will unlock the GIL if and only if it is currently acquired;
|
|
recursively calling `@jit(nogil=True)` functions is perfectly safe:
|
|
|
|
```python
|
|
from numba import jit
|
|
|
|
@jit(nopython=True, nogil=True)
|
|
def numba_recurse(n: int) -> int:
|
|
if n <= 0:
|
|
return 0
|
|
|
|
return numba_recurse(n - 1)
|
|
|
|
numba_recurse(2);
|
|
```
|
|
|
|
## Conclusion
|
|
|
|
Before finishing, it's important to address pain points that will show up if these techniques are
|
|
used in a more realistic project:
|
|
|
|
First, code running in a GIL-free context will likely also need non-trivial data structures;
|
|
GIL-free functions aren't useful if they're constantly interacting with Python objects whose access
|
|
requires the GIL. Cython provides
|
|
[extension types](http://docs.cython.org/en/latest/src/tutorial/cdef_classes.html) and Numba
|
|
provides a [`@jitclass`](https://numba.pydata.org/numba-doc/dev/user/jitclass.html) decorator to
|
|
address this need.
|
|
|
|
Second, building and distributing applications that make use of Cython/Numba can be complicated.
|
|
Cython packages require running the compiler, (potentially) linking/packaging external dependencies,
|
|
and distributing a binary wheel. Numba is generally simpler because the code being distributed is
|
|
pure Python, but can be tricky since errors aren't detected until runtime.
|
|
|
|
Finally, while unlocking the GIL is often a solution in search of a problem, both Cython and Numba
|
|
provide tools to directly manage the GIL when appropriate. This enables true parallelism (not just
|
|
[concurrency](https://stackoverflow.com/a/1050257)) that is impossible in vanilla Python.
|